WormBase Tree Display for Variation: WBVar00106244
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| WBVar00106244 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00106244 | |||
| Other_name | pas11103 | ||||
| cewivar00015076 | |||||
| Y38E10A.7.1:c.-859T>C | |||||
| HGVSg | CHROMOSOME_II:g.12605117T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y38E10A | |
| Flanking_sequences | gtttgccgaactaggccattttggctcagccatatctgtggtagttttacggcgcgttgcgtgtcgcgtcgcggctcgatcttagttgtaaaactaaatgtatttgtccgtgtggagtacgcgttgtccggcgggcgattgtcaatggagcgcgagaaattcaatgaggaaggccagaaccaggtgactactcagaaatcactctttttgatctttgaattgaataaatcatttgaaacaacacttattcggaaatgcgattattcatgtctgttaaatataccgtttaataggattatt | gggagagaaaacagactagaacaaagttgaataaataaacctttgagatcttcgaagataccgatgagtctggacactccaaaatagtgcactaatccaagaattgacgatggtgattccggcaactgccgtcagttccaagcctgaacattgagcttgacaggcaacgcgtcttgtttcccaaaacattttaagacgtgatctctgaagaaatttagtttaagctcgttaaaaatattttcgtaatccgagaccgattaaaatactccctgtctcgaggagagtttgacaccttgatac | |||
| Mapping_target | Y38E10A | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (31) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01248175 | |||
| WBVar01314759 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012585 | |||
| Transcript | Y38E10A.7.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y38E10A.7.1:c.-859T>C | ||||
| cDNA_position | 732 | ||||
| Exon_number | 1/6 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
