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WormBase Tree Display for Variation: WBVar00105873

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Name Class

WBVar00105873NamePublic_nameWBVar00105873
Other_namepas10732
snp_F37H8[11]
haw28904
cewivar00094975
T06D8.1e.1:c.-51+137G>A
T06D8.1i.1:c.-51+137G>A
T06D8.1a.1:c.-51+137G>A
HGVSgCHROMOSOME_II:g.11203463G>A
Sequence_detailsSMapS_parentSequenceF37H8
Flanking_sequencestcatctagaaattgtgcccgcctctctagaatgtcgaacaaatctttaattcttacagttttgcactcaacaaagggagtgcgtgcgccgctcctccacgaatcgaatatttgcggggacgtctggcgtggatcacgataatttgggccaaagacactaaaaaggtaggtattgtaagatgtacttgccaagggcgaaaagatgatgttttagaattagacaactagagagacacagttttgtggaattttggggggaaattcttgaaacacggtgaacattaatttttcatgggttcggaaacatttaggatcttctatggttaaggaacggttttctaagacttttttcgtaggccggcaaatttttttctttagttaggtgcctgcctgcctagcctgcacctcggcagtaggcgggtagacattttttttgttcattaataatagtcttacttttaaaaatcttgatttccagtataacaccttgttaaaaaattaaagtttgaaaattttttatttcgtttcactgagcgaaatctttttttaatttttcttattcacaaattttcaaaaccgtatttttgagactaaaatctac
Mapping_targetF37H8
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (16)
LaboratoryAX
RW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Wicks
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00175654
WBVar01376463
WBVar01244554
WBVar00244628
StatusLive
AffectsGeneWBGene00011522
TranscriptT06D8.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06D8.1e.1:c.-51+137G>A
Intron_number1/21
T06D8.1i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06D8.1i.1:c.-51+137G>A
Intron_number1/23
T06D8.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06D8.1a.1:c.-51+137G>A
Intron_number1/26
ReferenceWBPaper00004703
WBPaper00037807
MethodWGS_Pasadena_Quinlan