WormBase Tree Display for Sequence: F37H8
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| F37H8 | DNA | F37H8 | 38914 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (11) | ||||
| CDS_child (239) | ||||||
| Transcript (15) | ||||||
| Genomic_non_canonical | WRM0638aF02 | 1988 | 34136 | |||
| PCR_product (18) | ||||||
| Allele (585) | ||||||
| Oligo_set | Aff_F37H8.1 | 10843 | 9946 | |||
| Aff_F37H8.3 | 8538 | 9817 | ||||
| Aff_F37H8.4 | 13994 | 14814 | ||||
| Aff_F37H8.5 | 15338 | 16183 | ||||
| Feature_object (274) | ||||||
| Feature_data | F37H8:Polysome | 1 | 38914 | |||
| F37H8:TranscriptionallyActiveRegion | 1 | 38914 | ||||
| F37H8:ChIPSeqTF | 1 | 38914 | ||||
| F37H8:TRF | 1 | 38914 | ||||
| F37H8:Dust | 1 | 38914 | ||||
| F37H8:inverted | 1 | 38914 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | VF37H8L | 38812 | ||||
| Overlap_left | K07C10 | |||||
| DB_info | Database | EMBL | NDB_AC | Z81534 | ||
| NDB_SV | Z81534.3 | |||||
| DB_remark | [100415] Sequence correction: insertion 1 bases acgtcgaagAcaccacga @ 34486 | |||||
| [121025] Sequence correction: SNP 0 bases @ 7902 | ||||||
| [121025] Sequence correction WBsf268524 : Insertion C1 bases from @ 21859 | ||||||
| [121025] Sequence correction WBsf267833 : Insertion C1 bases from @ 23078 | ||||||
| [121025] Sequence correction WBsf267927 : Insertion G1 bases from @ 23795 | ||||||
| [121025] Sequence correction WBsf267922 : Insertion T1 bases from @ 27352 | ||||||
| [121025] Sequence correction WBsf268488 : Insertion G1 bases from @ 29706 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Gregory J | ||||
| From_laboratory | HX | |||||
| Date_directory | 100415 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F37H8 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 889ca3d1990e5f9c76636f223b023b21 | ||||
| Status | Finished | 07 Nov 1996 00:00:00 | ||||
| Submitted | 06 Nov 1996 00:00:00 | |||||
| Annotated | 20 Oct 1997 00:00:00 | |||||
| Map | Sequence-II | Ends | Left | 6649 | ||
| Right | 6678 | |||||
| Interpolated_map_position | II | 3.35403 | ||||
| Assembly_tags | Clone left end | 1 | 4 | Left end of F37H8 | ||
| Finished Left | 1 | 4 | ||||
| Clone right end | 16027 | 16030 | Right end of K07C10 | |||
| 38911 | 38914 | right end F37H8 | ||||
| annotation | 16791 | 16988 | First of 12 copies of a 200bp tandem repeat. Restriction digest suggests 500bp (2.5 copies) is missing. Repeat has this sequence: GTCATATATATGTCTAATATTCAGTTTTTCTGATTAAACTGGAAGCtTCTGGCACCTAGAAAAATTTTGTAATTAAATTCTGAAAGCGTTTAAAATTTGAAACAAGTCCCCGAAGaAAAATTTTTAAAAAAGTTAATTTCAAGTCAGATATTAATTTTTAAAGTTATGAAACCTAATTAAATCTCCCAATAAAAAATGC | |||
| 24593 | 24674 | Covered by cosmid PCR only. May contain base inacuracies. Assembly confirmed by restriction digest. | ||||
| 24733 | 24748 | Single clone region. Assembly confirmed by restriction digest. | ||||
| Finished Right | 38911 | 38914 | ||||
| Method | Genomic_canonical |
