WormBase Tree Display for Variation: WBVar00103627
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| WBVar00103627 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00103627 | |||
| Other_name | pas8486 | ||||
| cewivar00013284 | |||||
| CE33427:p.Cys92= | |||||
| M03A1.7.1:c.276C>T | |||||
| HGVSg | CHROMOSOME_II:g.4563315C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | M03A1 | |
| Flanking_sequences | agctgaagctatgctgtgccacgttgaaggatgccgataaggagtgcgtcgatcgattctgtgacttcaatgctctttctcaagctaacgtaagttgtctcctgagagctagttgcgcgtcaattctgatgtatttagtcagcttactagaaataaccattacacgttcttatttcagattctgaacttcatgtcgacttgcggagagcgtggaccaactgtcggagaaatgtgggattgtgcttccctccgtcacaaccacgaggactgctgcaagaaggccggtgtctctggagaatg | ctcaagtactgtaccgctcataagggagctccatccaactatttggactatgctttctgtaccgagaacttcaacgagatccgtgattgcttctacaaccatttggacaagaacgagccattcaagaagctctaaatggaaatataataattgaaattttctttatattatgaaacgtgtatttaataatatggaataaagatcaacttgatgataaagttaacagttttccaagctattttgtcttttgattggcttgtccggagttctggaattgccagttcaaaggcacatgatgtt | |||
| Mapping_target | M03A1 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (35) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01239330 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00000928 | |||
| Transcript | M03A1.7.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | M03A1.7.1:c.276C>T | ||||
| HGVSp | CE33427:p.Cys92= | ||||
| cDNA_position | 277 | ||||
| CDS_position | 276 | ||||
| Protein_position | 92 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | tgC/tgT | ||||
| Amino_acid_change | C | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
