WormBase Tree Display for Gene: WBGene00000928
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| WBGene00000928 | SMap | S_parent | Sequence | M03A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dao-2 | Person_evidence | WBPerson359 | |||||
| Sequence_name | M03A1.7 | ||||||||
| Molecular_name | M03A1.7 | ||||||||
| M03A1.7.1 | |||||||||
| CE33427 | |||||||||
| Other_name | CELE_M03A1.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dao-2 | ||||||||
| DB_info | Database | AceView | gene | 2E853 | |||||
| WormQTL | gene | WBGene00000928 | |||||||
| WormFlux | gene | WBGene00000928 | |||||||
| NDB | locus_tag | CELE_M03A1.7 | |||||||
| NCBI | gene | 173793 | |||||||
| RefSeq | protein | NM_182273.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315483 | |||||||
| TrEMBL | UniProtAcc | Q86LS4 | |||||||
| UniProt_GCRP | UniProtAcc | Q86LS4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dao | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar01826566 | |||||||||
| WBVar00364314 | |||||||||
| WBVar00171609 | |||||||||
| WBVar00726626 | |||||||||
| WBVar00726627 | |||||||||
| WBVar00726628 | |||||||||
| WBVar00103627 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | dao-2 encodes a (putatively) secreted protein with a DB module; dao-2 is down-regulated in daf-2 mutant adults by comparison with normal adults, and thus may be involved in dauer formation. | Paper_evidence | WBPaper00005073 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; ABarppaapa; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by thirty-six chemicals including methylmercury hydroxide; 1-methylnicotinamide; and manganese chloride based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M03A1.7 | |||||||
| Corresponding_transcript | M03A1.7.1 | ||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf644108 | ||||||||
| WBsf644109 | |||||||||
| WBsf644110 | |||||||||
| WBsf657481 | |||||||||
| WBsf657482 | |||||||||
| WBsf987634 | |||||||||
| WBsf987635 | |||||||||
| WBsf987636 | |||||||||
| WBsf1012099 | |||||||||
| WBsf221143 | |||||||||
| Experimental_info | Expr_pattern | Expr1024128 | |||||||
| Expr1030578 | |||||||||
| Expr1154540 | |||||||||
| Expr2010786 | |||||||||
| Expr2029023 | |||||||||
| Drives_construct | WBCnstr00037196 | ||||||||
| Construct_product | WBCnstr00037196 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (341) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | II | Position | -3.90628 | Error | 0.021567 | |||
| Positive | Positive_clone | M03A1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005073 | ||||||||
| WBPaper00017047 | |||||||||
| WBPaper00023823 | |||||||||
| Remark | Sequence connection from [Yu H, Larsen PL], [krb 020711] | ||||||||
| Sequence connection changed to .7 from .3 following a split of the gene. | Paper_evidence | WBPaper00005073 | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
