WormBase Tree Display for Variation: WBVar00103147
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| WBVar00103147 | Name | Public_name | WBVar00103147 | ||
|---|---|---|---|---|---|
| Other_name | pas8006 | ||||
| haw23775 | |||||
| haw129555 | |||||
| cewivar00089432 | |||||
| F53C3.13e.1:c.957-945G>A | |||||
| F53C3.13f.1:c.963-945G>A | |||||
| F53C3.13b.1:c.957-379G>A | |||||
| HGVSg | CHROMOSOME_II:g.3921331C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F53C3 | |
| Flanking_sequences | acatttaccggtgcatccattttgagggcgtgaccgtttacacgtggtgaccgagtgtcccatgtcggtttgatctacgtagatctacgagaatcgcgggaatttaaacgccgcagacttctcaactgatttcgcatggctgagaacgtgctgacgtcacatttttggagaaaattcccgcattttttgtagatcaaaccgtgatgggacagcttgacaccacgtgtttatgctccgcctctttcttggtttttttttgtttccaatgtttccaatgcttcggaatttgttaatccggaa | tataaaaacttccaaaattgacgaggcttatcagagaatcgagcatgtcctggagatcgtttcgagacccaaggaaggggcggggcataagagaccacgcccataaaataggcggagtttttcagagacacgcccatttcttggctctcttaggccaaatttacagtagtttttcagataaaactgcaaattctaccgtactcccaattcaaaacttttaaatttttttgattaaaatgtgttaagttggaaaaagaagcggttcacgagtggacaatttattatagtaagaagggtaag | |||
| Mapping_target | F53C3 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (25) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00549420 | |||
| WBVar01369660 | |||||
| WBVar00170525 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00018756 | |||
| Transcript | F53C3.13e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F53C3.13e.1:c.957-945G>A | ||||
| Intron_number | 5/6 | ||||
| F53C3.13b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F53C3.13b.1:c.957-379G>A | ||||
| Intron_number | 5/6 | ||||
| F53C3.13f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F53C3.13f.1:c.963-945G>A | ||||
| Intron_number | 5/6 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
