WormBase Tree Display for Variation: WBVar00102225
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| WBVar00102225 | Name | Public_name | WBVar00102225 | ||
|---|---|---|---|---|---|
| Other_name | pas7084 | ||||
| snp_Y75B8A[11] | |||||
| haw48630 | |||||
| haw147133 | |||||
| cewivar00028026 | |||||
| Y75B8A.35a.2:c.382+854G>A | |||||
| Y75B8A.35a.1:c.382+854G>A | |||||
| Y75B8A.35b.2:c.331+854G>A | |||||
| Y75B8A.35b.3:c.331+854G>A | |||||
| Y75B8A.35b.1:c.331+854G>A | |||||
| HGVSg | CHROMOSOME_III:g.12338205G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y75B8A | |
| Flanking_sequences | actaccgtaatcatacagtactcctaccgtgccaccattgtaccactacagtaccccaactgcagactacaaagactacatagactacaaactatggacaaacggaataagcgctttatatatagtaaatgatagtattatatactatagtattaatatatacatatatcatatattatagtatatatatatatatatatatatatatatatatatatagtaatatattatagtattaatatagtattaaaaagtatgatataaaaatcacccgaaaatggtgataggaggagtataagg | atgattatctcgaaaaatcatatatttctcttgtcggaaataaatgttagcaacagcaacataaacatgattcatacttccttcggaattgctaacacttaaatttttttccctgatcaatgacatttattacgataagcagcatatgtgatcaattagctggtcagctatataatttatcattaggaataattgaaattgaaaaactttagagcattaatactttagagcatcaccgaaaaatcagttttcagtaatttttttcctagtaaattcgtaaaaatttattccattttaaag | |||
| Mapping_target | Y75B8A | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (32) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00181354 | |||
| WBVar01337204 | |||||
| WBVar01272448 | |||||
| WBVar00248134 | |||||
| WBVar00566998 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006986 | |||
| Transcript | Y75B8A.35b.3 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y75B8A.35b.3:c.331+854G>A | ||||
| Intron_number | 5/10 | ||||
| Y75B8A.35a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y75B8A.35a.2:c.382+854G>A | ||||
| Intron_number | 4/9 | ||||
| Y75B8A.35b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y75B8A.35b.1:c.331+854G>A | ||||
| Intron_number | 4/9 | ||||
| Y75B8A.35a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y75B8A.35a.1:c.382+854G>A | ||||
| Intron_number | 3/8 | ||||
| Y75B8A.35b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y75B8A.35b.2:c.331+854G>A | ||||
| Intron_number | 5/10 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
