WormBase Tree Display for Variation: WBVar00101349
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WBVar00101349 | Name | Public_name | WBVar00101349 | ||
---|---|---|---|---|---|
Other_name | pas6208 | ||||
cewivar00115768 | |||||
R12H7.1b.1:c.200-65T>C | |||||
R12H7.1a.2:c.392-65T>C | |||||
R12H7.1a.1:c.392-65T>C | |||||
HGVSg | CHROMOSOME_X:g.13213777T>C | ||||
Sequence_details | SMap | S_parent | Sequence | R12H7 | |
Flanking_sequences | aaaaatatatccaggaagacacataaatatgtgacgtgaggtccgaagcatcagcctactaccaaatagcaaaaaacaaaattgttgttttcaagaaaaaaacgaagaaaaagcgtcaagaacggcgtgaagaagaagaacaacaaaaatatcgcggaatgaatgcgcgggccttcgtcgatacttttcgcctcaagcgcttcgaagctttcctctccttctctcacctcgagggagtatacataaattttctttttttttgaaagcttcttgcttgttgttgtttaggactaaaaattt | ttagggagcaaaaaaaaataaaattcaggaattctaatatataagctaaataggcaaatttcaggaattcatgtgcagtctctggttcaaatggcttgtgactccagattgttggatttggaatcgaggaacagagcgttgcaaaccatcgcaacaaatgtagaagaagcgctacacgtgaaacatcaagtggtatgaaaactgtaaaacacaagagtacccaatacgcacaaaacattctagcgtctttgagtcgccctgctgtgtaccttcaagcataatcacagccaataatattaa | |||
Mapping_target | R12H7 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (15) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006749 | |||
Transcript | R12H7.1a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R12H7.1a.2:c.392-65T>C | ||||
Intron_number | 6/10 | ||||
R12H7.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R12H7.1a.1:c.392-65T>C | ||||
Intron_number | 5/9 | ||||
R12H7.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R12H7.1b.1:c.200-65T>C | ||||
Intron_number | 2/5 | ||||
Method | WGS_Pasadena_Quinlan |