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WormBase Tree Display for Variation: WBVar00101349

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Name Class

WBVar00101349NamePublic_nameWBVar00101349
Other_namepas6208
cewivar00115768
R12H7.1b.1:c.200-65T>C
R12H7.1a.2:c.392-65T>C
R12H7.1a.1:c.392-65T>C
HGVSgCHROMOSOME_X:g.13213777T>C
Sequence_detailsSMapS_parentSequenceR12H7
Flanking_sequencesaaaaatatatccaggaagacacataaatatgtgacgtgaggtccgaagcatcagcctactaccaaatagcaaaaaacaaaattgttgttttcaagaaaaaaacgaagaaaaagcgtcaagaacggcgtgaagaagaagaacaacaaaaatatcgcggaatgaatgcgcgggccttcgtcgatacttttcgcctcaagcgcttcgaagctttcctctccttctctcacctcgagggagtatacataaattttctttttttttgaaagcttcttgcttgttgttgtttaggactaaaaatttttagggagcaaaaaaaaataaaattcaggaattctaatatataagctaaataggcaaatttcaggaattcatgtgcagtctctggttcaaatggcttgtgactccagattgttggatttggaatcgaggaacagagcgttgcaaaccatcgcaacaaatgtagaagaagcgctacacgtgaaacatcaagtggtatgaaaactgtaaaacacaagagtacccaatacgcacaaaacattctagcgtctttgagtcgccctgctgtgtaccttcaagcataatcacagccaataatattaa
Mapping_targetR12H7
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006749
TranscriptR12H7.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR12H7.1a.2:c.392-65T>C
Intron_number6/10
R12H7.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR12H7.1a.1:c.392-65T>C
Intron_number5/9
R12H7.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR12H7.1b.1:c.200-65T>C
Intron_number2/5
MethodWGS_Pasadena_Quinlan