WormBase Tree Display for Variation: WBVar00098511
expand all nodes | collapse all nodes | view schema
WBVar00098511 | Name | Public_name | WBVar00098511 | ||
---|---|---|---|---|---|
Other_name | pas3370 | ||||
cewivar00081855 | |||||
F36H5.3b.1:c.1293-12C>A | |||||
F36H5.3a.1:c.1293-12C>A | |||||
HGVSg | CHROMOSOME_II:g.1765059C>A | ||||
Sequence_details | SMap | S_parent | Sequence | F36H5 | |
Flanking_sequences | ggtttacgcgaaatgctggttcaagttggtgtcagccaacgggaaaagtttgatgagacttcaaaatgctgtttttcaatgcgaagacacttgtgaattggataagttcaccagatgggaggatatgatgacggattatgcgattgacgattatgtgactatagaggctcatgttgaaatttatgatattgttgaaaaggatattgatttattggcaccttcactgagcaatgccctggatgaacagactttttatgcgtaatttcttggttttcgactagaaggatctacctataaata | attttttacagaggaagcttcttttcagctttcacaatcagtaatatttcgagatttgaagatgatgagaaacaatggggtaatacggaaaaacgttataatattccatggtaagtccatgtcactttgcagcaaaaaagcctaatgtttcaggaggctgcgagcgaaaaaatcatttgattttctcgaaattaatctgttctgcgacgaagaaaatattatgactaccaataaattggtagaagcggaatgcacattttgtttggtgtcctctaatggaaattccctaaaacaaaaatt | |||
Mapping_target | F36H5 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00018102 | |||
Transcript | F36H5.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F36H5.3b.1:c.1293-12C>A | ||||
Intron_number | 6/11 | ||||
F36H5.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F36H5.3a.1:c.1293-12C>A | ||||
Intron_number | 6/12 | ||||
Method | WGS_Pasadena_Quinlan |