WormBase Tree Display for Variation: WBVar00094684
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| WBVar00094684 | Evidence | Paper_evidence | WBPaper00005096 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | or170 | |||||
| Other_name | W10C6.1.1:c.4520C>T | ||||||
| CE54528:p.Ala1507Val | |||||||
| HGVSg | CHROMOSOME_II:g.11119152C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | W10C6 | |||
| Flanking_sequences | gttgcctgtcgatgcttattacggctatgg | aattgtgagggattttttattacccagatt | |||||
| Mapping_target | W10C6 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00005096 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | EU | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003133 | |||||
| WBGene00305652 | |||||||
| Transcript | W10C6.3 | ||||||
| W10C6.1.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | W10C6.1.1:c.4520C>T | ||||||
| HGVSp | CE54528:p.Ala1507Val | ||||||
| cDNA_position | 4583 | ||||||
| CDS_position | 4520 | ||||||
| Protein_position | 1507 | ||||||
| Exon_number | 12/17 | ||||||
| Codon_change | gCa/gTa | ||||||
| Amino_acid_change | A/V | ||||||
| Interactor | WBInteraction000518316 | ||||||
| Genetics | Interpolated_map_position | II | 3.31746 | ||||
| Description | Phenotype | WBPhenotype:0001216 | Paper_evidence | WBPaper00004484 | |||
| Curator_confirmed | WBPerson205 | ||||||
| Reference | WBPaper00004484 | ||||||
| WBPaper00005096 | |||||||
| Method | Substitution_allele |
