WormBase Tree Display for Variation: WBVar00094429
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| WBVar00094429 | Name | Public_name | ok3417 | ||||
|---|---|---|---|---|---|---|---|
| Other_name | C08D8.2b.1:c.167_727+97delinsAGAACCGAATTGTTACTTGGGATA | ||||||
| C08D8.2b.2:c.167_727+97delinsAGAACCGAATTGTTACTTGGGATA | |||||||
| C08D8.2a.1:c.167_727+97delinsAGAACCGAATTGTTACTTGGGATA | |||||||
| HGVSg | CHROMOSOME_V:g.8337525_8338312delinsAGAACCGAATTGTTACTTGGGATA | ||||||
| Sequence_details | SMap | S_parent | Sequence | C08D8 | |||
| Flanking_sequences | acgagaaccgaattgtttcttgggatgaag | ataaaaattgaaattcttgaaaaataattg | |||||
| Mapping_target | C08D8 | ||||||
| Type_of_mutation | Insertion | AGAACCGAATTGTTACTTGGGATA | |||||
| Deletion | |||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00033152 | ||||||
| Laboratory | RB | ||||||
| Person | WBPerson46 | ||||||
| WBPerson2315 | |||||||
| KO_consortium_allele | |||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006582 | |||||
| Transcript | C08D8.2b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C08D8.2b.1:c.167_727+97delinsAGAACCGAATTGTTACTTGGGATA | ||||||
| cDNA_position | 212-? | ||||||
| CDS_position | 167-? | ||||||
| Protein_position | 56-? | ||||||
| Intron_number | 4-6/9 | ||||||
| Exon_number | 4-6/10 | ||||||
| C08D8.2a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | C08D8.2a.1:c.167_727+97delinsAGAACCGAATTGTTACTTGGGATA | ||||||
| cDNA_position | 169-? | ||||||
| CDS_position | 167-? | ||||||
| Protein_position | 56-? | ||||||
| Intron_number | 4-6/9 | ||||||
| Exon_number | 4-6/10 | ||||||
| C08D8.2b.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | C08D8.2b.2:c.167_727+97delinsAGAACCGAATTGTTACTTGGGATA | ||||||
| cDNA_position | 174-? | ||||||
| CDS_position | 167-? | ||||||
| Protein_position | 56-? | ||||||
| Intron_number | 4-6/9 | ||||||
| Exon_number | 4-6/10 | ||||||
| Description | Phenotype_not_observed | WBPhenotype:0000643 | Person_evidence | WBPerson2315 | |||
| WBPerson12966 | |||||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Information submitted by A. Cox and S. Oh. | Person_evidence | WBPerson2315 | ||||
| WBPerson12966 | |||||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Allele sequenced by Abbi Cox and Soohyun Oh | Curator_confirmed | WBPerson2970 | ||||
| Method | KO_consortium_allele |
