WormBase Tree Display for Variation: WBVar00092115
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WBVar00092115 | Name | Public_name | ok837 | ||
---|---|---|---|---|---|
Other_name | C02C2.3.1:c.304-124_873del | ||||
HGVSg | CHROMOSOME_III:g.7867113_7868219del | ||||
Sequence_details | SMap | S_parent | Sequence | C02C2 | |
Flanking_sequences | tttcgcacttaagcaaaaaaagcagaatgg | gtagcatctctaatatccatgacgttcttt | |||
Mapping_target | C02C2 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok837_external | ||||
ok837_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00031661 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000845 | |||
Transcript | C02C2.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | C02C2.3.1:c.304-124_873del | ||||
cDNA_position | ?-953 | ||||
CDS_position | ?-873 | ||||
Protein_position | ?-291 | ||||
Intron_number | 3-6/8 | ||||
Exon_number | 4-7/9 | ||||
Isolation | Mutagen | UV/TMP | |||
Reference | WBPaper00065617 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |