WormBase Tree Display for Variation: WBVar00091834

WBVar00091834 Name: Public_name: ok547
    HGVSg: CHROMOSOME_X:g.7578967_7581080del
  Sequence_details: SMap: S_parent: Sequence: F08C6
    Flanking_sequences: tcaaagaaaataactttggcaatggcagaa acaggaacgacagaaaatgtatccgtattt
    Mapping_target: F08C6
    Type_of_mutation: Deletion
    PCR_product: OK547_external
      OK547_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037474
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00017241
      WBGene00201705
    Transcript: F08C6.16 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: 121-?
        Exon_number: 1/1
      F08C6.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 220-?
        CDS_position: 220-?
        Protein_position: 74-?
        Intron_number: 2-5/6
        Exon_number: 2-7/7
      F08C6.2b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 200-?
        CDS_position: 196-?
        Protein_position: 66-?
        Intron_number: 2-5/6
        Exon_number: 2-7/7
  Isolation: Mutagen: TMP/UV
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele