WormBase Tree Display for Variation: WBVar00091497

WBVar00091497 Evidence: Paper_evidence: WBPaper00004723
  Name: Public_name: ok186
    Other_name: F33D4.1a.1:c.564+20_1533del
      F33D4.1b.1:c.561+23_1530del
    HGVSg: CHROMOSOME_IV:g.7712653_7714019del
  Sequence_details: SMap: S_parent: Sequence: F33D4
    Flanking_sequences: caacagctgtggttagtagagtttaaaata ggtaaatcacgtgctgacattgcatacagt
    Mapping_target: F33D4
    Type_of_mutation: Deletion
    PCR_product: ok186_external
      ok186_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000059
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00171604
      WBGene00003607
    Transcript: F33D4.10
      F33D4.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F33D4.1b.1:c.561+23_1530del
        cDNA_position: ?-1691
        CDS_position: ?-1530
        Protein_position: ?-510
        Intron_number: 5-9/10
        Exon_number: 6-10/11
      F33D4.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F33D4.1a.1:c.564+20_1533del
        cDNA_position: ?-1699
        CDS_position: ?-1533
        Protein_position: ?-511
        Intron_number: 5-9/10
        Exon_number: 6-10/11
    Interactor: WBInteraction000543106
      WBInteraction000543107
      WBInteraction000557017
      WBInteraction000564464
  Genetics: Mapping_data: In_multi_point: 4520
  Description (2)
  Reference: WBPaper00031850
    WBPaper00004723
    WBPaper00045724
    WBPaper00051068
    WBPaper00059728
  Remark: Last updated on 29 Nov 2002
    Knockout originally requested for F33D4.1 before it was renamed to F33D4.1a/b
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele