WormBase Tree Display for Variation: WBVar00091380
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| WBVar00091380 | Evidence | Paper_evidence | WBPaper00004281 | ||
|---|---|---|---|---|---|
| Name | Public_name | nr2017 | |||
| Other_name | C05B5.7b.1:c.358_600+304delinsTATGTTTAAGTTAAGTTTATAGTTTAAGTTTAAAG | ||||
| C05B5.7a.1:c.358_600+304delinsTATGTTTAAGTTAAGTTTATAGTTTAAGTTTAAAG | |||||
| C05B5.7a.2:c.358_600+304delinsTATGTTTAAGTTAAGTTTATAGTTTAAGTTTAAAG | |||||
| HGVSg | CHROMOSOME_III:g.10015582_10016177delinsCTTTAAACTTAAACTATAAACTTAACTTAAACATA | ||||
| Sequence_details | SMap | S_parent | Sequence | C05B5 | |
| Flanking_sequences | tcaaaagttcgagaaattgtcaacactaac | gtttggaatggtttatcagtttttatattc | |||
| Mapping_target | C05B5 | ||||
| Type_of_mutation | Insertion | TATGTTTAAGTTAAGTTTATAGTTTAAGTTTAAAG | |||
| Deletion | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00026359 | ||||
| Laboratory | NS | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00004344 | |||
| Transcript | C05B5.7a.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | C05B5.7a.2:c.358_600+304delinsTATGTTTAAGTTAAGTTTATAGTTTAAGTTTAAAG | ||||
| cDNA_position | 358-? | ||||
| CDS_position | 358-? | ||||
| Protein_position | 120-? | ||||
| Intron_number | 1-2/4 | ||||
| Exon_number | 1-2/5 | ||||
| C05B5.7a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | C05B5.7a.1:c.358_600+304delinsTATGTTTAAGTTAAGTTTATAGTTTAAGTTTAAAG | ||||
| cDNA_position | 382-? | ||||
| CDS_position | 358-? | ||||
| Protein_position | 120-? | ||||
| Intron_number | 2-3/6 | ||||
| Exon_number | 2-3/7 | ||||
| C05B5.7b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | C05B5.7b.1:c.358_600+304delinsTATGTTTAAGTTAAGTTTATAGTTTAAGTTTAAAG | ||||
| cDNA_position | 358-? | ||||
| CDS_position | 358-? | ||||
| Protein_position | 120-? | ||||
| Intron_number | 1-2/2 | ||||
| Exon_number | 1-2/3 | ||||
| Genetics | Interpolated_map_position | III | 1.5366 | ||
| Mapping_data | In_multi_point | 4633 | |||
| Reference | WBPaper00004281 | ||||
| Method | Deletion_and_insertion_allele |
