WormBase Tree Display for Variation: WBVar00089583
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WBVar00089583 | Evidence | Paper_evidence | WBPaper00004497 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n531 | |||||
Other_name | T25C12.1a.1:c.873+1G>A | ||||||
T25C12.1b.1:c.867+1G>A | |||||||
HGVSg | CHROMOSOME_X:g.11483283G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | T25C12 | |||
Flanking_sequences | aaggctggtggtccagaacgaaaaccaagg | tttgtataaagtattaaatttcacaagtca | |||||
Mapping_target | T25C12 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00004497 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | MT | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00003003 | |||||
Transcript | T25C12.1b.1 | VEP_consequence | splice_donor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | T25C12.1b.1:c.867+1G>A | ||||||
Intron_number | 6/11 | ||||||
T25C12.1a.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T25C12.1a.1:c.873+1G>A | ||||||
Intron_number | 8/13 | ||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00004497 | |||
Genetics | Interpolated_map_position | X | 3.8622 | ||||
Reference | WBPaper00004497 | ||||||
Remark | This substitution affects both isoforms | Paper_evidence | WBPaper00004497 | ||||
Method | Substitution_allele |