WormBase Tree Display for Variation: WBVar00089240

WBVar00089240 Evidence: Person_evidence: WBPerson342
  Name: Public_name: mu232
    Other_name (12)
    HGVSg: CHROMOSOME_V:g.4499797T>A
  Sequence_details: SMap: S_parent: Sequence: T28F12
    Flanking_sequences: CAGCAAGGCCCCGTGTGTCGGCAACGACGA GGCGCAGAGGGTACTTCTTCTTCTTCTTCT
    Mapping_target: T28F12
    Type_of_mutation: Substitution: t a
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004865
    Laboratory: CF
    Status: Live
  Affects: Gene: WBGene00006796
    Transcript: T28F12.2e.1 (12)
      T28F12.2d.4 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2d.4:c.-1235T>A
        cDNA_position: 322
        Exon_number: 1/12
      T28F12.2d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2d.1:c.-1224-1422T>A
        Intron_number: 1/11
      T28F12.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2a.1:c.124-1422T>A
        Intron_number: 2/11
      T28F12.2b.1 (12)
      T28F12.2d.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2d.2:c.-1242-1422T>A
        Intron_number: 1/11
      T28F12.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2c.1:c.-1806-1422T>A
        Intron_number: 1/10
      T28F12.2d.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2d.3:c.-1253T>A
        cDNA_position: 471
        Exon_number: 1/12
      T28F12.2c.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2c.2:c.-1433T>A
        cDNA_position: 310
        Exon_number: 1/11
      T28F12.2f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28F12.2f.1:c.124-1422T>A
        Intron_number: 2/10
  Genetics: Interpolated_map_position: V -5.19498
  Reference: WBPaper00025016
    WBPaper00050135
  Method: Substitution_allele