WormBase Tree Display for Variation: WBVar00089143

WBVar00089143 Evidence: Paper_evidence: WBPaper00002087
  Name: Public_name: mn392
    Other_name: CE06757:p.Ser140Ter
      C02H7.1.1:c.419C>G
    HGVSg: CHROMOSOME_X:g.764797C>G
  Sequence_details: SMap: S_parent: Sequence: C02H7
    Flanking_sequences: aggacaaaaagggagatgaagaagagaagt aactactaaaaaacgtagcagtaagaaggt
    Mapping_target: C02H7
    Type_of_mutation: Substitution: c g Paper_evidence: WBPaper00031624
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00034382
    Laboratory: SP
    Status: Live
  Affects: Gene: WBGene00001127
    Transcript: C02H7.1.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C02H7.1.1:c.419C>G
        HGVSp: CE06757:p.Ser140Ter
        cDNA_position: 436
        CDS_position: 419
        Protein_position: 140
        Exon_number: 4/9
        Codon_change: tCa/tGa
        Amino_acid_change: S/*
    Interactor: WBInteraction000503546
      WBInteraction000503547
      WBInteraction000503548
      WBInteraction000503549
  Genetics: Interpolated_map_position: X -19.5015
    Mapping_data: In_multi_point: 3080
        3081
        3082
        3083
  Description: Phenotype: WBPhenotype:0000013 Paper_evidence: WBPaper00002087
        Curator_confirmed: WBPerson48
        Remark: 1-20% as many dauers formed as for N2. Paper_evidence: WBPaper00002087
            Curator_confirmed: WBPerson48
      WBPhenotype:0000324 Paper_evidence: WBPaper00002087
        Person_evidence: WBPerson261
        Curator_confirmed: WBPerson48
          WBPerson712
        Remark: Slightly short. Paper_evidence: WBPaper00002087
            Curator_confirmed: WBPerson48
          Animals slightly short. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000843 Paper_evidence: WBPaper00002087
        Curator_confirmed: WBPerson48
        Remark: 10-30% as efficient mating as N2. Paper_evidence: WBPaper00002087
            Curator_confirmed: WBPerson48
      WBPhenotype:0001434 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Chemotaxis defective. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0001435 Paper_evidence: WBPaper00002087
        Curator_confirmed: WBPerson48
        Remark: Chemotaxis frequency 0.07 versus 0.71 for N2. Paper_evidence: WBPaper00002087
            Curator_confirmed: WBPerson48
      WBPhenotype:0002053 Paper_evidence: WBPaper00055368
        Curator_confirmed: WBPerson466
        Remark: survive 10nM ivermectin Paper_evidence: WBPaper00055368
            Curator_confirmed: WBPerson466
        Affected_by: Molecule: WBMol:00002786 Paper_evidence: WBPaper00055368
              Curator_confirmed: WBPerson466
      WBPhenotype:0002535 Paper_evidence: WBPaper00002087
        Person_evidence: WBPerson261
        Curator_confirmed: WBPerson48
          WBPerson712
        Remark: Defects in dye filling. Paper_evidence: WBPaper00002087
            Curator_confirmed: WBPerson48
          Defective in dye (FITC or DiO) filling of amphid and phasmid neurons. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00002087
          Curator_confirmed: WBPerson48
    Phenotype_not_observed: WBPhenotype:0000398 Paper_evidence: WBPaper00002087
        Curator_confirmed: WBPerson48
      WBPhenotype:0000646 Paper_evidence: WBPaper00002087
        Curator_confirmed: WBPerson48
        Remark: Normal mobility when prodded. Paper_evidence: WBPaper00002087
            Curator_confirmed: WBPerson48
  Reference: WBPaper00002087
    WBPaper00055368
  Method: Substitution_allele