WormBase Tree Display for Variation: WBVar00087744
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| WBVar00087744 | Evidence | Paper_evidence | WBPaper00044616 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | hc3 | |||||
| Other_name | CE32072:p.Ser69Pro | ||||||
| W09B6.3a.1:c.205T>C | |||||||
| HGVSg | CHROMOSOME_II:g.1123959T>C | ||||||
| Sequence_details | SMap | S_parent | Sequence | W09B6 | |||
| Flanking_sequences | tttcaggattccggcattcattttatcttc | caaaagccacgtgtatacaatatccgtcaa | |||||
| Mapping_target | W09B6 | ||||||
| Type_of_mutation | Substitution | t | c | Paper_evidence | WBPaper00044616 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000359 | ||||||
| Laboratory | BA | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00021103 | |||||
| Transcript | W09B6.3a.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| HGVSc | W09B6.3a.1:c.205T>C | ||||||
| HGVSp | CE32072:p.Ser69Pro | ||||||
| cDNA_position | 207 | ||||||
| CDS_position | 205 | ||||||
| Protein_position | 69 | ||||||
| Exon_number | 4/13 | ||||||
| Codon_change | Tca/Cca | ||||||
| Amino_acid_change | S/P | ||||||
| Genetics | Interpolated_map_position | II | -15.5661 | ||||
| Mapping_data | In_multi_point | 199 | |||||
| Description | Phenotype (11) | ||||||
| Phenotype_not_observed | WBPhenotype:0000033 | Paper_evidence | WBPaper00000495 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Animals grow and develop at the same rate as wild type, initiating egg laying at 45 hr post-hatching, as do N2 hermaphrodites. | Paper_evidence | WBPaper00000495 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000186 | Paper_evidence | WBPaper00000495 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Oocytes are produced and are capable of being fertilized. | Paper_evidence | WBPaper00000495 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000284 | Paper_evidence | WBPaper00000495 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Sperm were transferred during copulation. | Paper_evidence | WBPaper00000495 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000670 | Paper_evidence | WBPaper00000495 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | At the start of their egg-laying period, 45 hr post-hatching at 25 deg C, the spermathecae of these hermaphrodites contain over 170 sperm. | Paper_evidence | WBPaper00000495 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000676 | Paper_evidence | WBPaper00000495 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Animals grow and develop at the same rate as wild type, initiating egg laying at 45 hr post-hatching, as do N2 hermaphrodites. | Paper_evidence | WBPaper00000495 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Reference | WBPaper00001075 | ||||||
| WBPaper00000495 | |||||||
| WBPaper00015949 | |||||||
| WBPaper00044616 | |||||||
| Method | Substitution_allele |
