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WormBase Tree Display for Variation: WBVar00087742

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Name Class

WBVar00087742EvidencePaper_evidenceWBPaper00027653
NamePublic_namehc1
Other_nameCE42470:p.Gly163Glu
F43G9.6b.1:c.488G>A
F43G9.6a.1:c.869G>A
CE10364:p.Gly290Glu
HGVSgCHROMOSOME_I:g.8629706C>T
Sequence_detailsSMapS_parentSequenceF43G9
Flanking_sequencesagcaaagattctatgtgatggttcagtgtgagcacacaagaccgaaacaacaatggaatc
Mapping_targetF43G9
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00027653
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000357
WBStrain00000368
WBStrain00000370
WBStrain00004232
WBStrain00006339
WBStrain00006342
WBStrain00007123
WBStrain00007124
LaboratoryBA
StatusLive
AffectsGeneWBGene00001414
TranscriptF43G9.6a.1 (12)
F43G9.6b.1 (12)
InteractorWBInteraction000501921
GeneticsInterpolated_map_positionI3.00681
Mapping_dataIn_2_point25
2507
2580
3214
In_multi_point (21)
In_pos_neg_data743
752
761
DescriptionPhenotype (13)
Phenotype_not_observedWBPhenotype:0000033Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
RemarkAnimals grow and develop at the same rate as wild type, initiating egg laying at 45 hr post-hatching, as do N2 hermaphrodites.Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
WBPhenotype:0000186Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
RemarkOocytes are produced and are capable of being fertilized.Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
WBPhenotype:0000284Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
RemarkSperm were transferred during copulation.Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
WBPhenotype:0000670Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
RemarkAt the start of their egg-laying period, 45 hr post-hatching at 25 deg C, the spermathecae of these hermaphrodites contain over 170 sperm.Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
WBPhenotype:0000676Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
RemarkAnimals grow and develop at the same rate as wild type, initiating egg laying at 45 hr post-hatching, as do N2 hermaphrodites.Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
WBPhenotype:0000982Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
RemarkSpermatids do not differ from those of wild type males.Paper_evidenceWBPaper00000495
Curator_confirmedWBPerson712
Disease_infoModels_diseaseDOID:11724
Models_disease_in_annotationWBDOannot00000059
ReferenceWBPaper00040337
WBPaper00014587
WBPaper00001075
WBPaper00000495
WBPaper00015973
WBPaper00015989
WBPaper00015949
WBPaper00044487
RemarkThe paper states that this g to a mutation leads to a G(290)Q frameshift, but the sequence at this location infact leads to a G(290)E mutationCurator_confirmedWBPerson2970
MethodSubstitution_allele