WormBase Tree Display for Variation: WBVar00086768
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WBVar00086768 | Name | Public_name | WBVar00086768 | ||
---|---|---|---|---|---|
Other_name | haw111128 | ||||
cewivar00277583 | |||||
CE53592:p.Val372= | |||||
ZK662.3a.1:c.1149G>A | |||||
ZK662.3b.1:c.1116G>A | |||||
ZK662.3c.1:c.1167G>A | |||||
CE53610:p.Val383= | |||||
ZK662.3d.1:c.1134G>A | |||||
CE53571:p.Val378= | |||||
CE53520:p.Val389= | |||||
HGVSg | CHROMOSOME_X:g.15712110G>A | ||||
Sequence_details | SMap | S_parent | Sequence | ZK662 | |
Flanking_sequences | cagcggttcaagctcaggcaattgt | aaccacacccagcaggtttgtcatt | |||
Mapping_target | ZK662 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003638 | |||
Transcript | ZK662.3c.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | ZK662.3c.1:c.1167G>A | ||||
HGVSp | CE53520:p.Val389= | ||||
cDNA_position | 1167 | ||||
CDS_position | 1167 | ||||
Protein_position | 389 | ||||
Exon_number | 10/16 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK662.3d.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK662.3d.1:c.1134G>A | ||||
HGVSp | CE53571:p.Val378= | ||||
cDNA_position | 1134 | ||||
CDS_position | 1134 | ||||
Protein_position | 378 | ||||
Exon_number | 10/16 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK662.3a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK662.3a.1:c.1149G>A | ||||
HGVSp | CE53610:p.Val383= | ||||
cDNA_position | 1282 | ||||
CDS_position | 1149 | ||||
Protein_position | 383 | ||||
Exon_number | 11/18 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK662.3b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK662.3b.1:c.1116G>A | ||||
HGVSp | CE53592:p.Val372= | ||||
cDNA_position | 1249 | ||||
CDS_position | 1116 | ||||
Protein_position | 372 | ||||
Exon_number | 11/18 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
Remark | [20081124 db] this Variation was previously named hw111128 | ||||
Method | WGS_Hawaiian_Waterston |