WormBase Tree Display for Variation: WBVar00086465
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WBVar00086465 | Name | Public_name | WBVar00086465 | ||
---|---|---|---|---|---|
Other_name | haw110825 | ||||
cewivar00159961 | |||||
F39D8.2b.1:c.344-52T>A | |||||
F39D8.2a.1:c.446-52T>A | |||||
F39D8.2d.1:c.92-52T>A | |||||
F39D8.2c.1:c.248-52T>A | |||||
HGVSg | CHROMOSOME_X:g.15418566T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F39D8 | |
Flanking_sequences | ttaaaaatggattatcatattgaaa | aagcatttttgtagataggacccat | |||
Mapping_target | F39D8 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009560 | |||
Transcript | F39D8.2c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.2c.1:c.248-52T>A | ||||
Intron_number | 2/3 | ||||
F39D8.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.2a.1:c.446-52T>A | ||||
Intron_number | 3/5 | ||||
F39D8.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.2d.1:c.92-52T>A | ||||
Intron_number | 1/2 | ||||
F39D8.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.2b.1:c.344-52T>A | ||||
Intron_number | 4/6 | ||||
Remark | [20081124 db] this Variation was previously named hw110825 | ||||
Method | WGS_Hawaiian_Waterston |