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WormBase Tree Display for Variation: WBVar00086465

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Name Class

WBVar00086465NamePublic_nameWBVar00086465
Other_namehaw110825
cewivar00159961
F39D8.2b.1:c.344-52T>A
F39D8.2a.1:c.446-52T>A
F39D8.2d.1:c.92-52T>A
F39D8.2c.1:c.248-52T>A
HGVSgCHROMOSOME_X:g.15418566T>A
Sequence_detailsSMapS_parentSequenceF39D8
Flanking_sequencesttaaaaatggattatcatattgaaaaagcatttttgtagataggacccat
Mapping_targetF39D8
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00009560
TranscriptF39D8.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39D8.2c.1:c.248-52T>A
Intron_number2/3
F39D8.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39D8.2a.1:c.446-52T>A
Intron_number3/5
F39D8.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39D8.2d.1:c.92-52T>A
Intron_number1/2
F39D8.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39D8.2b.1:c.344-52T>A
Intron_number4/6
Remark[20081124 db] this Variation was previously named hw110825
MethodWGS_Hawaiian_Waterston