WormBase Tree Display for Variation: WBVar00086461
expand all nodes | collapse all nodes | view schema
WBVar00086461 | Name | Public_name | WBVar00086461 | ||
---|---|---|---|---|---|
Other_name | pas33668 | ||||
haw110821 | |||||
cewivar00063698 | |||||
F39D8.2c.1:c.91-1425T>A | |||||
F39D8.2a.1:c.289-1425T>A | |||||
F39D8.2b.1:c.187-1425T>A | |||||
HGVSg | CHROMOSOME_X:g.15416059T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F39D8 | |
Flanking_sequences | ttatccaaaagaccgatttgtattt | tgttccaaaataaatgtaagttatc | |||
Mapping_target | F39D8 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (39) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00221892 | |||
Status | Live | ||||
Affects | Gene | WBGene00009560 | |||
Transcript | F39D8.2c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.2c.1:c.91-1425T>A | ||||
Intron_number | 1/3 | ||||
F39D8.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.2a.1:c.289-1425T>A | ||||
Intron_number | 2/5 | ||||
F39D8.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.2b.1:c.187-1425T>A | ||||
Intron_number | 3/6 | ||||
Remark | [20081124 db] this Variation was previously named hw110821 | ||||
Method | WGS_Hawaiian_Waterston |