WormBase Tree Display for Variation: WBVar00083926
expand all nodes | collapse all nodes | view schema
WBVar00083926 | Name | Public_name | WBVar00083926 | ||
---|---|---|---|---|---|
Other_name | haw108286 | ||||
cewivar00276624 | |||||
C53C7.5b.1:n.519+3A>T | |||||
C53C7.5a.1:n.519+3A>T | |||||
HGVSg | CHROMOSOME_X:g.13043120A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C53C7 | |
Flanking_sequences | caacctcaaaaattaaaaaaaaggt | tttttttttcttatcaaatttattt | |||
Mapping_target | C53C7 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00014294 | |||
Pseudogene | C53C7.5a | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | ||
VEP_impact | LOW | ||||
HGVSc | C53C7.5a.1:n.519+3A>T | ||||
Intron_number | 7/21 | ||||
C53C7.5b | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | |||
VEP_impact | LOW | ||||
HGVSc | C53C7.5b.1:n.519+3A>T | ||||
Intron_number | 7/21 | ||||
Remark | [20081124 db] this Variation was previously named hw108286 | ||||
Method | WGS_Hawaiian_Waterston |