WormBase Tree Display for Variation: WBVar00083537
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WBVar00083537 | Name | Public_name | WBVar00083537 | ||
---|---|---|---|---|---|
Other_name | haw107897 | ||||
cewivar00157777 | |||||
CE37355:p.Leu401= | |||||
F17E5.2.2:c.1203A>T | |||||
F17E5.2.1:c.1203A>T | |||||
HGVSg | CHROMOSOME_X:g.12397833A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F17E5 | |
Flanking_sequences | aaaataacttatttcaggggtatct | ccaaatctgttgggcattattccat | |||
Mapping_target | F17E5 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (24) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008924 | |||
Transcript | F17E5.2.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F17E5.2.2:c.1203A>T | ||||
HGVSp | CE37355:p.Leu401= | ||||
cDNA_position | 1315 | ||||
CDS_position | 1203 | ||||
Protein_position | 401 | ||||
Exon_number | 12/15 | ||||
Codon_change | ctA/ctT | ||||
Amino_acid_change | L | ||||
F17E5.2.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F17E5.2.1:c.1203A>T | ||||
HGVSp | CE37355:p.Leu401= | ||||
cDNA_position | 1291 | ||||
CDS_position | 1203 | ||||
Protein_position | 401 | ||||
Exon_number | 12/15 | ||||
Codon_change | ctA/ctT | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw107897 | ||||
Method | WGS_Hawaiian_Waterston |