WormBase Tree Display for Variation: WBVar00081855
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WBVar00081855 | Name | Public_name | WBVar00081855 | ||
---|---|---|---|---|---|
Other_name | haw106215 | ||||
cewivar00275310 | |||||
F18G5.2a.1:c.1137C>T | |||||
CE53356:p.Ser334= | |||||
F18G5.2b.1:c.1002C>T | |||||
CE53188:p.Ser379= | |||||
HGVSg | CHROMOSOME_X:g.9255140C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F18G5 | |
Flanking_sequences | gccaggataagtacacggatagatc | agctacagaaattttgcctacgaac | |||
Mapping_target | F18G5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003981 | |||
Transcript | F18G5.2b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F18G5.2b.1:c.1002C>T | ||||
HGVSp | CE53356:p.Ser334= | ||||
cDNA_position | 1184 | ||||
CDS_position | 1002 | ||||
Protein_position | 334 | ||||
Exon_number | 10/12 | ||||
Codon_change | tcC/tcT | ||||
Amino_acid_change | S | ||||
F18G5.2a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F18G5.2a.1:c.1137C>T | ||||
HGVSp | CE53188:p.Ser379= | ||||
cDNA_position | 1180 | ||||
CDS_position | 1137 | ||||
Protein_position | 379 | ||||
Exon_number | 11/13 | ||||
Codon_change | tcC/tcT | ||||
Amino_acid_change | S | ||||
Remark | [20081124 db] this Variation was previously named hw106215 | ||||
Method | WGS_Hawaiian_Waterston |