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WormBase Tree Display for Variation: WBVar00080788

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Name Class

WBVar00080788NamePublic_nameWBVar00080788
Other_namehaw105148
cewivar00274700
C54D2.5a.2:c.-76-691C>T
C54D2.5a.1:c.-76-691C>T
HGVSgCHROMOSOME_X:g.7861998G>A
Sequence_detailsSMapS_parentSequenceC54D2
Flanking_sequencestccgatgatattatttcagtttttaggggtgatgagagacgaacgtgtga
Mapping_targetC54D2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.-76-691C>T
Intron_number1/31
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.-76-691C>T
Intron_number2/32
Remark[20081124 db] this Variation was previously named hw105148
MethodWGS_Hawaiian_Waterston