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WormBase Tree Display for Variation: WBVar00079290

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Name Class

WBVar00079290NamePublic_nameWBVar00079290
Other_nameuCE6-942
haw103650
cewivar00126880
T22B7.1a.2:c.145-541C>T
T22B7.1a.3:c.145-541C>T
T22B7.1a.1:c.145-541C>T
HGVSgCHROMOSOME_X:g.5669146C>T
Sequence_detailsSMapS_parentSequenceT22B7
Flanking_sequencescttttcaagtctgggaattcatattattttcttagttaggaagtctcaaa
Mapping_targetT22B7
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (72)
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
SNP_Swan
WGS_Andersen
HistoryAcquires_mergeWBVar01469028
WBVar00274274
StatusLive
AffectsGeneWBGene00001182
TranscriptT22B7.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT22B7.1a.3:c.145-541C>T
Intron_number3/12
T22B7.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT22B7.1a.1:c.145-541C>T
Intron_number3/12
T22B7.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT22B7.1a.2:c.145-541C>T
Intron_number2/11
ReferenceWBPaper00040707
WBPaper00005369
Remark[20081124 db] this Variation was previously named hw103650
MethodWGS_Hawaiian_Waterston