WormBase Tree Display for Variation: WBVar00079290

WBVar00079290 Name: Public_name: WBVar00079290
    Other_name: uCE6-942
      haw103650
      cewivar00126880
      T22B7.1a.2:c.145-541C>T
      T22B7.1a.3:c.145-541C>T
      T22B7.1a.1:c.145-541C>T
    HGVSg: CHROMOSOME_X:g.5669146C>T
  Sequence_details: SMap: S_parent: Sequence: T22B7
    Flanking_sequences: cttttcaagtctgggaattcatatt attttcttagttaggaagtctcaaa
    Mapping_target: T22B7
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004445 From_analysis: WGS_Andersen
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00004602 From_analysis: SNP_Swan
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00004603 From_analysis: WGS_Andersen
      WBStrain00005299 From_analysis: WGS_Andersen
      WBStrain00005300 From_analysis: WGS_Andersen
      WBStrain00005305 From_analysis: WGS_Andersen
      WBStrain00005307 From_analysis: WGS_Andersen
      WBStrain00005309 From_analysis: WGS_Andersen
      WBStrain00005315 From_analysis: WGS_Andersen
      WBStrain00005832 From_analysis: WGS_Andersen
      WBStrain00005835 From_analysis: WGS_Andersen
      WBStrain00006369 From_analysis: WGS_Andersen
      WBStrain00006697 From_analysis: WGS_Andersen
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00022851 From_analysis: WGS_Andersen
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00022855 From_analysis: WGS_Andersen
      WBStrain00022856 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022866 From_analysis: WGS_Andersen
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00022879 From_analysis: WGS_Andersen
      WBStrain00022880 From_analysis: WGS_Andersen
      WBStrain00022883 From_analysis: WGS_Andersen
      WBStrain00022884 From_analysis: WGS_Andersen
      WBStrain00022885 From_analysis: WGS_Andersen
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00022888 From_analysis: WGS_Andersen
      WBStrain00022889 From_analysis: WGS_Andersen
      WBStrain00022894 From_analysis: WGS_Andersen
      WBStrain00022900 From_analysis: WGS_Andersen
      WBStrain00022901 From_analysis: WGS_Andersen
      WBStrain00022902 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00022903 From_analysis: WGS_Andersen
      WBStrain00022906 From_analysis: WGS_Andersen
      WBStrain00022910 From_analysis: WGS_Andersen
      WBStrain00022911 From_analysis: WGS_Andersen
      WBStrain00022998 From_analysis: WGS_Andersen
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023065 From_analysis: WGS_Andersen
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023083 From_analysis: WGS_Andersen
      WBStrain00023084 From_analysis: WGS_Andersen
      WBStrain00023085 From_analysis: WGS_Andersen
      WBStrain00023111 From_analysis: WGS_Andersen
      WBStrain00023112 From_analysis: WGS_Andersen
      WBStrain00023124 From_analysis: WGS_Andersen
      WBStrain00023135 From_analysis: WGS_Andersen
      WBStrain00023136 From_analysis: WGS_Andersen
      WBStrain00023137 From_analysis: WGS_Andersen
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023142 From_analysis: WGS_Andersen
      WBStrain00023143 From_analysis: WGS_Andersen
      WBStrain00023152 From_analysis: WGS_Andersen
      WBStrain00023164 From_analysis: WGS_Andersen
      WBStrain00023176 From_analysis: WGS_Andersen
      WBStrain00023177 From_analysis: WGS_Andersen
      WBStrain00023180 From_analysis: WGS_Andersen
      WBStrain00023224 From_analysis: WGS_Andersen
      WBStrain00023234 From_analysis: WGS_Andersen
      WBStrain00023240 From_analysis: WGS_Andersen
      WBStrain00023279 From_analysis: WGS_Andersen
      WBStrain00023280 From_analysis: WGS_Andersen
      WBStrain00023281 From_analysis: WGS_Andersen
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027661 From_analysis: WGS_Andersen
      WBStrain00027669 From_analysis: WGS_Andersen
      WBStrain00030546 From_analysis: WGS_Andersen
      WBStrain00030851 From_analysis: WGS_Andersen
      WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Swan
      WGS_Andersen
    History: Acquires_merge: WBVar01469028
        WBVar00274274
    Status: Live
  Affects: Gene: WBGene00001182
    Transcript: T22B7.1a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T22B7.1a.3:c.145-541C>T
        Intron_number: 3/12
      T22B7.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T22B7.1a.1:c.145-541C>T
        Intron_number: 3/12
      T22B7.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T22B7.1a.2:c.145-541C>T
        Intron_number: 2/11
  Reference: WBPaper00040707
    WBPaper00005369
  Remark: [20081124 db] this Variation was previously named hw103650
  Method: WGS_Hawaiian_Waterston