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WormBase Tree Display for Variation: WBVar00079164

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Name Class

WBVar00079164NamePublic_nameWBVar00079164
Other_namehaw103524
cewivar00126767
C54G7.3g.1:c.4010+125C>T
C54G7.3c.1:c.4313+125C>T
C54G7.3d.1:c.4160+125C>T
C54G7.3h.1:c.3857+125C>T
C54G7.3e.1:c.4169+125C>T
C54G7.3i.1:c.3866+125C>T
C54G7.3a.1:c.3713+125C>T
C54G7.3f.1:c.4016+125C>T
HGVSgCHROMOSOME_X:g.5526747G>A
Sequence_detailsSMapS_parentSequenceC54G7
Flanking_sequencesgtataactgtgaaaaagtatccaaagttaaaatttcgagaaatattggta
Mapping_targetC54G7
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002983
TranscriptC54G7.3i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3i.1:c.3866+125C>T
Intron_number25/29
C54G7.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3c.1:c.4313+125C>T
Intron_number26/30
C54G7.3h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3h.1:c.3857+125C>T
Intron_number25/29
C54G7.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3f.1:c.4016+125C>T
Intron_number24/28
C54G7.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3d.1:c.4160+125C>T
Intron_number25/29
C54G7.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3e.1:c.4169+125C>T
Intron_number25/29
C54G7.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3a.1:c.3713+125C>T
Intron_number25/30
C54G7.3g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54G7.3g.1:c.4010+125C>T
Intron_number26/30
Remark[20081124 db] this Variation was previously named hw103524
MethodWGS_Hawaiian_Waterston