WormBase Tree Display for Variation: WBVar00079164
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WBVar00079164 | Name | Public_name | WBVar00079164 | ||
---|---|---|---|---|---|
Other_name | haw103524 | ||||
cewivar00126767 | |||||
C54G7.3g.1:c.4010+125C>T | |||||
C54G7.3c.1:c.4313+125C>T | |||||
C54G7.3d.1:c.4160+125C>T | |||||
C54G7.3h.1:c.3857+125C>T | |||||
C54G7.3e.1:c.4169+125C>T | |||||
C54G7.3i.1:c.3866+125C>T | |||||
C54G7.3a.1:c.3713+125C>T | |||||
C54G7.3f.1:c.4016+125C>T | |||||
HGVSg | CHROMOSOME_X:g.5526747G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C54G7 | |
Flanking_sequences | gtataactgtgaaaaagtatccaaa | gttaaaatttcgagaaatattggta | |||
Mapping_target | C54G7 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00002983 | |||
Transcript | C54G7.3i.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3i.1:c.3866+125C>T | ||||
Intron_number | 25/29 | ||||
C54G7.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3c.1:c.4313+125C>T | ||||
Intron_number | 26/30 | ||||
C54G7.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3h.1:c.3857+125C>T | ||||
Intron_number | 25/29 | ||||
C54G7.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3f.1:c.4016+125C>T | ||||
Intron_number | 24/28 | ||||
C54G7.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3d.1:c.4160+125C>T | ||||
Intron_number | 25/29 | ||||
C54G7.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3e.1:c.4169+125C>T | ||||
Intron_number | 25/29 | ||||
C54G7.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3a.1:c.3713+125C>T | ||||
Intron_number | 25/30 | ||||
C54G7.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54G7.3g.1:c.4010+125C>T | ||||
Intron_number | 26/30 | ||||
Remark | [20081124 db] this Variation was previously named hw103524 | ||||
Method | WGS_Hawaiian_Waterston |