WormBase Tree Display for Variation: WBVar00079055
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WBVar00079055 | Name | Public_name | WBVar00079055 | ||
---|---|---|---|---|---|
Other_name | haw103415 | ||||
cewivar00273544 | |||||
C41A3.2a.1:c.-28+357T>G | |||||
C41A3.1b.1:c.86+42A>C | |||||
C41A3.1a.1:c.86+42A>C | |||||
HGVSg | CHROMOSOME_X:g.5413937A>C | ||||
Sequence_details | SMap | S_parent | Sequence | C41A3 | |
Flanking_sequences | gttttgaaagtttcaaagtaaagta | ctttaaaaaaatgaaagaaatgaat | |||
Mapping_target | C41A3 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00016558 | |||
WBGene00016559 | |||||
Transcript | C41A3.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C41A3.2a.1:c.-28+357T>G | ||||
Intron_number | 1/17 | ||||
C41A3.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C41A3.1b.1:c.86+42A>C | ||||
Intron_number | 1/31 | ||||
C41A3.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C41A3.1a.1:c.86+42A>C | ||||
Intron_number | 1/30 | ||||
Remark | [20081124 db] this Variation was previously named hw103415 | ||||
Method | WGS_Hawaiian_Waterston |