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WormBase Tree Display for Variation: WBVar00079055

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Name Class

WBVar00079055NamePublic_nameWBVar00079055
Other_namehaw103415
cewivar00273544
C41A3.2a.1:c.-28+357T>G
C41A3.1b.1:c.86+42A>C
C41A3.1a.1:c.86+42A>C
HGVSgCHROMOSOME_X:g.5413937A>C
Sequence_detailsSMapS_parentSequenceC41A3
Flanking_sequencesgttttgaaagtttcaaagtaaagtactttaaaaaaatgaaagaaatgaat
Mapping_targetC41A3
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016558
WBGene00016559
TranscriptC41A3.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC41A3.2a.1:c.-28+357T>G
Intron_number1/17
C41A3.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC41A3.1b.1:c.86+42A>C
Intron_number1/31
C41A3.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC41A3.1a.1:c.86+42A>C
Intron_number1/30
Remark[20081124 db] this Variation was previously named hw103415
MethodWGS_Hawaiian_Waterston