WormBase Tree Display for Gene: WBGene00016558
expand all nodes | collapse all nodes | view schema
| WBGene00016558 | SMap | S_parent | Sequence | C41A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pks-1 | Paper_evidence | WBPaper00049938 | |||||
| Person_evidence | WBPerson6498 | ||||||||
| Sequence_name | C41A3.1 | ||||||||
| Molecular_name | C41A3.1a | ||||||||
| C41A3.1a.1 | |||||||||
| CE47147 | |||||||||
| C41A3.1b | |||||||||
| CE51741 | |||||||||
| C41A3.1b.1 | |||||||||
| Other_name | CELE_C41A3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | pks-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Oct 2016 11:12:21 | WBPerson2970 | Name_change | CGC_name | pks-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pks | ||||||||
| Allele (428) | |||||||||
| Strain | WBStrain00037677 | ||||||||
| WBStrain00037742 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00009342 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009343 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008667 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable fatty acid synthase activity. Predicted to be involved in fatty acid biosynthetic process. Expressed in CANL and CANR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C41A3.1a | |||||||
| C41A3.1b | |||||||||
| Corresponding_CDS_history | C41A3.1:wp230 | ||||||||
| Corresponding_transcript | C41A3.1a.1 | ||||||||
| C41A3.1b.1 | |||||||||
| Other_sequence | ACC04306_1 | ||||||||
| JI248424.1 | |||||||||
| Acan_isotig15023 | |||||||||
| CJC17941_1 | |||||||||
| JI252988.1 | |||||||||
| Name_isotig06062 | |||||||||
| Associated_feature | WBsf662363 | ||||||||
| WBsf662783 | |||||||||
| WBsf662784 | |||||||||
| WBsf662785 | |||||||||
| WBsf662786 | |||||||||
| WBsf662787 | |||||||||
| WBsf662788 | |||||||||
| WBsf1005263 | |||||||||
| WBsf1005264 | |||||||||
| WBsf1022951 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042271 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001268 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011827 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13049 | ||||||||
| Expr1017683 | |||||||||
| Expr1037098 | |||||||||
| Expr1146262 | |||||||||
| Expr2014950 | |||||||||
| Expr2033185 | |||||||||
| Drives_construct | WBCnstr00027977 | ||||||||
| Construct_product | WBCnstr00027977 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (195) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | X | Position | -5.3325 | |||||
| Positive | Positive_clone | C41A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049938 | |||||||||
| WBPaper00052066 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057525 | |||||||||
| WBPaper00061781 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
