WormBase Tree Display for CDS: C41A3.1b
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| C41A3.1b | Evidence | Curator_confirmed | WBPerson1983 | ||
|---|---|---|---|---|---|
| Inferred_automatically | make_isoforms.pl | ||||
| SMap | S_parent | Sequence | C41A3 | ||
| Structure | Source_exons (31) | ||||
| DB_info | Database | KEGG | KEGG_id | 3.1.2.14 | |
| TrEMBL | UniProtAcc | A0A1C3NSM6 | |||
| UniProt | UniProtAcc | A0A1C3NSM6 | |||
| AlphaFold | entry | A0A1C3NSM6 | |||
| NCBI_protein | GI_number | GI:1047833060 | |||
| Protein_id | CHROMOSOME_X | SBV53393 | 1 | ||
| DB_remark | PKS-1 protein; contains similarity to Pfam domains PF00109 (Beta-ketoacyl synthase, N-terminal domain), PF00550 (Phosphopantetheine attachment site), PF00698 (Acyl transferase domain), PF00975 (Thioesterase domain), PF02801 (Beta-ketoacyl synthase, C-terminal domain), PF08659 (KR domain), PF14765 (Polyketide synthase dehydratase N-terminal domain), PF16197 (Ketoacyl-synthetase C-terminal extension); contains similarity to Interpro domains IPR016035 (Acyl transferase/acyl hydrolase/lysophospholipase), IPR020841 (Polyketide synthase, beta-ketoacyl synthase domain), IPR036736 (ACP-like superfamily), IPR042104 (Polyketide synthase, dehydratase domain superfamily), IPR016036 (Malonyl-CoA ACP transacylase, ACP-binding), IPR013968 (Polyketide synthase, ketoreductase domain), IPR032821 (Polyketide synthase, C-terminal extension), IPR029058 (Alpha/Beta hydrolase fold), IPR014031 (Beta-ketoacyl synthase, C-terminal), IPR036291 (NAD(P)-binding domain superfamily), IPR014043 (Acyl transferase), IPR014030 (Beta-ketoacyl synthase, N-terminal), IPR049551 (Polyketide synthase, dehydratase domain, C-terminal), IPR016039 (Thiolase-like), IPR020806 (Polyketide synthase, phosphopantetheine-binding domain), IPR009081 (Phosphopantetheine binding ACP domain), IPR001227 (Acyl transferase domain superfamily), IPR001031 (Thioesterase) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Curator_confirmed | WBPerson1983 | |||
| From_analysis | RNASeq_splice | ||||
| Visible (12) | |||||
| Method | curated |
