WormBase Tree Display for Variation: WBVar00078914
expand all nodes | collapse all nodes | view schema
| WBVar00078914 | Name | Public_name | WBVar00078914 | ||
|---|---|---|---|---|---|
| Other_name | haw103274 | ||||
| cewivar00126399 | |||||
| F32A6.4f.3:c.-159-18C>T | |||||
| F32A6.4a.1:c.1105-18C>T | |||||
| F32A6.4f.4:c.-159-18C>T | |||||
| F32A6.4e.1:c.307-18C>T | |||||
| F32A6.4a.2:c.1105-18C>T | |||||
| F32A6.4d.1:c.436-18C>T | |||||
| F32A6.4f.1:c.-159-18C>T | |||||
| F32A6.4f.2:c.-159-18C>T | |||||
| HGVSg | CHROMOSOME_X:g.5292793G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F32A6 | |
| Flanking_sequences | attatgagctgaaatggaagaaatg | gaattgaacaaaaaaaaagaggtgg | |||
| Mapping_target | F32A6 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (12) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000092 | |||
| Transcript | F32A6.4e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4e.1:c.307-18C>T | ||||
| Intron_number | 3/7 | ||||
| F32A6.4a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4a.2:c.1105-18C>T | ||||
| Intron_number | 10/15 | ||||
| F32A6.4f.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4f.2:c.-159-18C>T | ||||
| Intron_number | 4/10 | ||||
| F32A6.4d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4d.1:c.436-18C>T | ||||
| Intron_number | 4/8 | ||||
| F32A6.4f.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4f.3:c.-159-18C>T | ||||
| Intron_number | 2/8 | ||||
| F32A6.4f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4f.1:c.-159-18C>T | ||||
| Intron_number | 10/16 | ||||
| F32A6.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4a.1:c.1105-18C>T | ||||
| Intron_number | 11/16 | ||||
| F32A6.4f.4 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F32A6.4f.4:c.-159-18C>T | ||||
| Intron_number | 1/7 | ||||
| Remark | [20081124 db] this Variation was previously named hw103274 | ||||
| Method | WGS_Hawaiian_Waterston |
