WormBase Tree Display for Variation: WBVar00078302
expand all nodes | collapse all nodes | view schema
WBVar00078302 | Name | Public_name | WBVar00078302 | ||
---|---|---|---|---|---|
Other_name | haw102662 | ||||
cewivar00273290 | |||||
CE51999:p.Leu1592= | |||||
R08E3.1a.1:c.4776A>T | |||||
R08E3.1b.2:c.4776A>T | |||||
CE52022:p.Leu1592= | |||||
R08E3.1b.1:c.4776A>T | |||||
HGVSg | CHROMOSOME_X:g.4831981A>T | ||||
Sequence_details | SMap | S_parent | Sequence | R08E3 | |
Flanking_sequences | atgagagtatgattatgagcaaact | cccctgtattggagtttaagagcca | |||
Mapping_target | R08E3 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019957 | |||
Transcript | R08E3.1b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | R08E3.1b.1:c.4776A>T | ||||
HGVSp | CE52022:p.Leu1592= | ||||
cDNA_position | 4791 | ||||
CDS_position | 4776 | ||||
Protein_position | 1592 | ||||
Exon_number | 38/48 | ||||
Codon_change | ctA/ctT | ||||
Amino_acid_change | L | ||||
R08E3.1b.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | R08E3.1b.2:c.4776A>T | ||||
HGVSp | CE52022:p.Leu1592= | ||||
cDNA_position | 4783 | ||||
CDS_position | 4776 | ||||
Protein_position | 1592 | ||||
Exon_number | 38/47 | ||||
Codon_change | ctA/ctT | ||||
Amino_acid_change | L | ||||
R08E3.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | R08E3.1a.1:c.4776A>T | ||||
HGVSp | CE51999:p.Leu1592= | ||||
cDNA_position | 4777 | ||||
CDS_position | 4776 | ||||
Protein_position | 1592 | ||||
Exon_number | 38/49 | ||||
Codon_change | ctA/ctT | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw102662 | ||||
Method | WGS_Hawaiian_Waterston |