WormBase Tree Display for Variation: WBVar00073771
expand all nodes | collapse all nodes | view schema
WBVar00073771 | Name | Public_name | WBVar00073771 | ||
---|---|---|---|---|---|
Other_name | haw98131 | ||||
cewivar00267226 | |||||
F53F8.4.1:c.484C>T | |||||
CE17858:p.Pro162Ser | |||||
HGVSg | CHROMOSOME_V:g.20691054G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F53F8 | |
Flanking_sequences | ttgaagtacattgcttggagggttg | tttggtgaatgctccgaacgagcac | |||
Mapping_target | F53F8 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00010001 | |||
Transcript | F53F8.4.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | F53F8.4.1:c.484C>T | ||||
HGVSp | CE17858:p.Pro162Ser | ||||
cDNA_position | 485 | ||||
CDS_position | 484 | ||||
Protein_position | 162 | ||||
Exon_number | 5/6 | ||||
Codon_change | Cca/Tca | ||||
Amino_acid_change | P/S | ||||
Remark | [20081124 db] this Variation was previously named hw98131 | ||||
Method | WGS_Hawaiian_Waterston |