WormBase Tree Display for Variation: WBVar00073749

WBVar00073749 Name: Public_name: WBVar00073749
    Other_name (18)
    HGVSg: CHROMOSOME_V:g.20669554T>A
  Sequence_details: SMap: S_parent: Sequence: W01F3
    Flanking_sequences: cagttccaacaacgccacgaccaac gctccagctgttcaaaccacaacta
    Mapping_target: W01F3
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00012186
    Transcript: W01F3.3h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3h.1:c.1320T>A
        HGVSp: CE47458:p.Thr440=
        cDNA_position: 1320
        CDS_position: 1320
        Protein_position: 440
        Exon_number: 6/17
        Codon_change: acT/acA
        Amino_acid_change: T
      W01F3.3d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3d.1:c.1983T>A
        HGVSp: CE43619:p.Thr661=
        cDNA_position: 1983
        CDS_position: 1983
        Protein_position: 661
        Exon_number: 7/17
        Codon_change: acT/acA
        Amino_acid_change: T
      W01F3.3e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3e.1:c.1983T>A
        HGVSp: CE43653:p.Thr661=
        cDNA_position: 1983
        CDS_position: 1983
        Protein_position: 661
        Exon_number: 7/16
        Codon_change: acT/acA
        Amino_acid_change: T
      W01F3.3a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3a.1:c.1983T>A
        HGVSp: CE40239:p.Thr661=
        cDNA_position: 2006
        CDS_position: 1983
        Protein_position: 661
        Exon_number: 8/17
        Codon_change: acT/acA
        Amino_acid_change: T
      W01F3.3b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3b.1:c.1983T>A
        HGVSp: CE43450:p.Thr661=
        cDNA_position: 1983
        CDS_position: 1983
        Protein_position: 661
        Exon_number: 7/17
        Codon_change: acT/acA
        Amino_acid_change: T
      W01F3.3c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3c.1:c.1596T>A
        HGVSp: CE43613:p.Thr532=
        cDNA_position: 1621
        CDS_position: 1596
        Protein_position: 532
        Exon_number: 7/16
        Codon_change: acT/acA
        Amino_acid_change: T
      W01F3.3f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3f.1:c.1320T>A
        HGVSp: CE47135:p.Thr440=
        cDNA_position: 1349
        CDS_position: 1320
        Protein_position: 440
        Exon_number: 7/15
        Codon_change: acT/acA
        Amino_acid_change: T
      W01F3.3g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W01F3.3g.1:c.1320T>A
        HGVSp: CE47236:p.Thr440=
        cDNA_position: 1320
        CDS_position: 1320
        Protein_position: 440
        Exon_number: 6/14
        Codon_change: acT/acA
        Amino_acid_change: T
  Remark: [20081124 db] this Variation was previously named hw98109
  Method: WGS_Hawaiian_Waterston