WormBase Tree Display for Variation: WBVar00071965
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WBVar00071965 | Name | Public_name | WBVar00071965 | ||
---|---|---|---|---|---|
Other_name | haw96325 | ||||
cewivar00264560 | |||||
Y60A3A.4a.1:c.111G>A | |||||
CE48301:p.Lys37= | |||||
Y60A3A.4b.1:c.111G>A | |||||
CE36045:p.Lys37= | |||||
HGVSg | CHROMOSOME_V:g.19973399G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | |
Flanking_sequences | tcggtgcctacctgattgtagtgaa | actccgaaaaaaatgaaaatggtta | |||
Mapping_target | Y60A3A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Andersen | |||||
WGS_Hawaiian_Waterston | |||||
WBStrain00023079 | From_analysis | WGS_Andersen | |||
WBStrain00027653 | From_analysis | WGS_Andersen | |||
WBStrain00027656 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01466512 | |||
Status | Live | ||||
Affects | Gene | WBGene00005389 | |||
Transcript | Y60A3A.4b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y60A3A.4b.1:c.111G>A | ||||
HGVSp | CE48301:p.Lys37= | ||||
cDNA_position | 114 | ||||
CDS_position | 111 | ||||
Protein_position | 37 | ||||
Exon_number | 2/6 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Y60A3A.4a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y60A3A.4a.1:c.111G>A | ||||
HGVSp | CE36045:p.Lys37= | ||||
cDNA_position | 116 | ||||
CDS_position | 111 | ||||
Protein_position | 37 | ||||
Exon_number | 2/6 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Remark | [20081124 db] this Variation was previously named hw96325 | ||||
Method | WGS_Hawaiian_Waterston |