WormBase Tree Display for Gene: WBGene00005389
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| WBGene00005389 | SMap | S_parent | Sequence | Y60A3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-173 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y60A3A.4 | ||||||||
| Molecular_name | Y60A3A.4a | ||||||||
| Y60A3A.4a.1 | |||||||||
| CE36045 | |||||||||
| Y60A3A.4b | |||||||||
| CE48301 | |||||||||
| Y60A3A.4b.1 | |||||||||
| Other_name | CELE_Y60A3A.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-173 | ||||||||
| DB_info | Database | AceView | gene | 5U441 | |||||
| WormQTL | gene | WBGene00005389 | |||||||
| WormFlux | gene | WBGene00005389 | |||||||
| NDB | locus_tag | CELE_Y60A3A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005389|UniProtKB=Q9U1Z8 | |||||||
| family | PTHR22941 | ||||||||
| NCBI | gene | 190432 | |||||||
| RefSeq | protein | NM_001307820.2 | |||||||
| NM_075465.3 | |||||||||
| TrEMBL | UniProtAcc | M1ZK04 | |||||||
| Q9U1Z8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9U1Z8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (93) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024323 | ||||||||
| Ortholog (16) | |||||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y60A3A.4a | |||||||
| Y60A3A.4b | |||||||||
| Corresponding_CDS_history | Y60A3A.4:wp113 | ||||||||
| Corresponding_transcript | Y60A3A.4a.1 | ||||||||
| Y60A3A.4b.1 | |||||||||
| Other_sequence | FG349254.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057812 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1025955 | ||||||||
| Expr1161250 | |||||||||
| Expr2016401 | |||||||||
| Expr2034613 | |||||||||
| Drives_construct | WBCnstr00035004 | ||||||||
| Construct_product | WBCnstr00035004 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (26) | |||||||||
| Map_info | Map | V | Position | 24.1765 | Error | 0.01788 | |||
| Positive | Positive_clone | Y60A3A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
