WormBase Tree Display for Variation: WBVar00065889
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| WBVar00065889 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00065889 | |||
| Other_name | pas24775 | ||||
| snp_C06E1[1] | |||||
| haw44881 | |||||
| cewivar00108262 | |||||
| C06E1.4.1:c.1058-19T>A | |||||
| HGVSg | CHROMOSOME_III:g.8586816A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C06E1 | |
| Flanking_sequences | gctaatacttcttttgaattgaaagttgcttttgtatttgataccaagtcaactatggatacatcaaagttcttgcgatttccaaaacgatcgaattcgatattcccagttaatgttccctctttgtgtccaattttcatctgtaatagtatgtattactgagcaggtttttttttgaaaaacgtacatttctaaaagcaactccgattgtttttccatgctcaaatgaagagaaaggtcgatttggatgagaacggtcagaaagaggatcacagtagattcctgaaagtccagaaaatt | aaaaaaaacgtttaacgtatccaacatttacctggaaatccacgattgaaaaatctcctatgtcgaaatgtaccatggaacaatgaatcattcgcttgcaggcactttgcaaatccatgccacgtaactaacattgcatcgtgtccaacagctgcctcaacactaacatcatctccacctcctaatgaagatgacgtcttcaaatgtttctttagtgaccaatactctcttccatctttattgattatattgaaacctgatatattgatatttccattttggaacatctcttggtcgtag | |||
| Mapping_target | C06E1 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00068798 | |||
| WBVar00243059 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001612 | |||
| Transcript | C06E1.4.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C06E1.4.1:c.1058-19T>A | ||||
| Intron_number | 6/15 | ||||
| Reference | WBPaper00004703 | ||||
| Method | WGS_Pasadena_Quinlan |
