WormBase Tree Display for Variation: WBVar00062757
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WBVar00062757 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00062757 | |||
Other_name | haw43673 | ||||
cewivar00150840 | |||||
R13F6.6a.2:c.539-14T>C | |||||
R13F6.6a.1:c.539-14T>C | |||||
R13F6.6c.1:c.1148-14T>C | |||||
R13F6.6b.2:c.179-14T>C | |||||
R13F6.6b.1:c.179-14T>C | |||||
HGVSg | CHROMOSOME_III:g.6854851A>G | ||||
Sequence_details | SMap | S_parent | Sequence | R13F6 | |
Flanking_sequences | ttttatcgtttgctgaaaagtttcc | aagtatagaatttatgattttaaac | |||
Mapping_target | R13F6 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (24) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01264791 | |||
Status | Live | ||||
Affects | Gene | WBGene00006971 | |||
Transcript | R13F6.6c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R13F6.6c.1:c.1148-14T>C | ||||
Intron_number | 6/11 | ||||
R13F6.6b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R13F6.6b.2:c.179-14T>C | ||||
Intron_number | 6/12 | ||||
R13F6.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R13F6.6a.1:c.539-14T>C | ||||
Intron_number | 7/13 | ||||
R13F6.6a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R13F6.6a.2:c.539-14T>C | ||||
Intron_number | 7/13 | ||||
R13F6.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R13F6.6b.1:c.179-14T>C | ||||
Intron_number | 5/11 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw43673 | ||||
Method | WGS_Hawaiian_Waterston |