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WormBase Tree Display for Variation: WBVar00062757

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Name Class

WBVar00062757EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00062757
Other_namehaw43673
cewivar00150840
R13F6.6a.2:c.539-14T>C
R13F6.6a.1:c.539-14T>C
R13F6.6c.1:c.1148-14T>C
R13F6.6b.2:c.179-14T>C
R13F6.6b.1:c.179-14T>C
HGVSgCHROMOSOME_III:g.6854851A>G
Sequence_detailsSMapS_parentSequenceR13F6
Flanking_sequencesttttatcgtttgctgaaaagtttccaagtatagaatttatgattttaaac
Mapping_targetR13F6
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (24)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01264791
StatusLive
AffectsGeneWBGene00006971
TranscriptR13F6.6c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR13F6.6c.1:c.1148-14T>C
Intron_number6/11
R13F6.6b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR13F6.6b.2:c.179-14T>C
Intron_number6/12
R13F6.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR13F6.6a.1:c.539-14T>C
Intron_number7/13
R13F6.6a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR13F6.6a.2:c.539-14T>C
Intron_number7/13
R13F6.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR13F6.6b.1:c.179-14T>C
Intron_number5/11
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw43673
MethodWGS_Hawaiian_Waterston