WormBase Tree Display for Variation: WBVar00056344
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WBVar00056344 | Name | Public_name | WBVar00056344 | ||
---|---|---|---|---|---|
Other_name | pas3667 | ||||
haw42391 | |||||
haw142819 | |||||
cewivar00105810 | |||||
F59A2.6d.1:c.3702-158G>T | |||||
F59A2.6b.1:c.3828-158G>T | |||||
F59A2.6c.1:c.3786-158G>T | |||||
F59A2.6a.1:c.3912-158G>T | |||||
HGVSg | CHROMOSOME_III:g.3422693G>T | ||||
Sequence_details | SMap | S_parent | Sequence | K01A11 | |
Flanking_sequences | agttttaattgaaaaaactcaaaaa | tcactggaagacggcaaaaaaacga | |||
Mapping_target | K01A11 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (17) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00098808 | |||
WBVar00562684 | |||||
WBVar01261857 | |||||
Status | Live | ||||
Affects | Gene | WBGene00010306 | |||
Transcript | F59A2.6a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6a.1:c.3912-158G>T | ||||
Intron_number | 16/19 | ||||
F59A2.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6c.1:c.3786-158G>T | ||||
Intron_number | 15/18 | ||||
F59A2.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6b.1:c.3828-158G>T | ||||
Intron_number | 14/17 | ||||
F59A2.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6d.1:c.3702-158G>T | ||||
Intron_number | 14/17 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw42391 | ||||
Method | WGS_Hawaiian_Waterston |