WormBase Tree Display for Variation: WBVar00056344

WBVar00056344 Name: Public_name: WBVar00056344
    Other_name: pas3667
      haw42391
      haw142819
      cewivar00105810
      F59A2.6d.1:c.3702-158G>T
      F59A2.6b.1:c.3828-158G>T
      F59A2.6c.1:c.3786-158G>T
      F59A2.6a.1:c.3912-158G>T
    HGVSg: CHROMOSOME_III:g.3422693G>T
  Sequence_details: SMap: S_parent: Sequence: K01A11
    Flanking_sequences: agttttaattgaaaaaactcaaaaa tcactggaagacggcaaaaaaacga
    Mapping_target: K01A11
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00098808
        WBVar00562684
        WBVar01261857
    Status: Live
  Affects: Gene: WBGene00010306
    Transcript: F59A2.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6a.1:c.3912-158G>T
        Intron_number: 16/19
      F59A2.6c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6c.1:c.3786-158G>T
        Intron_number: 15/18
      F59A2.6b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6b.1:c.3828-158G>T
        Intron_number: 14/17
      F59A2.6d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6d.1:c.3702-158G>T
        Intron_number: 14/17
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw42391
  Method: WGS_Hawaiian_Waterston