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WormBase Tree Display for Variation: WBVar00052576

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Name Class

WBVar00052576NamePublic_nameWBVar00052576
Other_namepas22112
snp_C50F4[2]
haw81059
cewivar00047053
CE26799:p.Ile225Thr
C50F4.1.1:c.674T>C
HGVSgCHROMOSOME_V:g.9528381T>C
Sequence_detailsSMapS_parentSequenceC50F4
Flanking_sequencescctcacagattgcaaagttacacgctgtcaactcaaaaactatcaataaacaattctcactcaatgtgcaagaaaattatggaaacatcatatcattcaaaaagaaaattcaaaaagaattgattgaagtgttggaaacagcagtaactactacagaagttgcagactacttcatgaatccatcctcagttattgaaaaagttggaattttgactcattacttggaagattggaaagatgaagatgcagatgaaaaggaaaaacataatgttatcgcacatggaagattgacagctgagattgcagatttgatgaggatgggaatttggtagagatcacagaatgggaagtacgtaattatttttaaaatagaaaaaactgcgttctactataatttttacttttgatctttcaacaacgaaaacctaattaatttagaacattcatcttggaaatccagtggaggatttagcaaatttgattgtttcatctgcagatgtcgacattcgacgaaaaaagttcatgaaagtgggttcgagagtcttatgggaacggcagagcaccagatgtttttgatgtaatttgttttaattttagata
Mapping_targetC50F4
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (42)
LaboratoryAX
RW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Wicks
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00213783
WBVar01274879
WBVar00243764
StatusLive
AffectsGeneWBGene00008229
TranscriptC50F4.1.1 (12)
ReferenceWBPaper00004703
WBPaper00037807
MethodWGS_Pasadena_Quinlan