WormBase Tree Display for Variation: WBVar00052272
expand all nodes | collapse all nodes | view schema
| WBVar00052272 | Name | Public_name | WBVar00052272 | ||
|---|---|---|---|---|---|
| Other_name | CE2-165 | ||||
| haw27266 | |||||
| haw131921 | |||||
| cewivar00139773 | |||||
| M05D6.4.1:c.673+172T>C | |||||
| HGVSg | CHROMOSOME_II:g.8479178A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | M05D6 | |
| Flanking_sequences | tatgatatctgaaatcaaagtttgtatcaattgtggggtgcttgacggggaagtttcgttgaatacggtttatgctattagtcttgcaactccactgctctacttttacagtttatatcttgccattgttttatcaaagatgaagcgcatttttgctattgttactgttgggatacgtttgaagacaaataagataaaagctgtcaaagtggaacgaaggggcaagcctttgattataaagttatatcat | tatctatagaatataaattatgagatcaacggaccagcaataataataaaacgttattttagtgaataacaattgataaagtttaacttctcatctaggttccaaaattgaatataaaaatttcaacgaaaaatagggaactgattgtgagaaaataagaatttttcttactatgtttatctgcaatttcttctttaaaatattgaccaacagttctctttttcttatcaactcttcttacaattgcatc | |||
| Mapping_target | M05D6 | ||||
| Type_of_mutation | Substitution | a | g | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (24) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson4037 | ||||
| WBPerson1562 | |||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar01308619 | |||
| WBVar00174016 | |||||
| WBVar00551786 | |||||
| WBVar01374287 | |||||
| WBVar01242354 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00010877 | |||
| Transcript | M05D6.4.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | M05D6.4.1:c.673+172T>C | ||||
| Intron_number | 3/6 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
