WormBase Tree Display for Variation: WBVar00051892
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| WBVar00051892 | Name | Public_name | WBVar00051892 | ||
|---|---|---|---|---|---|
| Other_name | CE1-213 | ||||
| haw13771 | |||||
| haw122047 | |||||
| cewivar00002401 | |||||
| M01E5.5b.1:c.400-22A>T | |||||
| M01E5.5a.1:c.616-22A>T | |||||
| HGVSg | CHROMOSOME_I:g.13294213A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | M01E5 | |
| Flanking_sequences | tttaggctaaaaatcggaaattttacgattttttgctcaaaaaattgaacacgatgcctgcgtaaatcgacattacatgctgctccggaaattttaatgtaatcgaaaaaattaaaagttaatccaaaaaaaaccacttccgtctaacctgaattacccaccagtaatatattttctcaaaaaaaaaatcaaaaactgttttctaaccttctacgagatactttaaataattaaatttgcacgaatcata | ttttatcatttatttttgcagaaacgaaagtcaaaaggagctgaaaagagcaagccaagtacatcaaagaaagacgccggcggcaaaaaagagccaccaaagaagaaagtgaagaaagaggaggatatagaagatatatgggaatggtggaaagaggaaaagaagcctgcaggtgttaaatggaattcccttcaacactgtggaccactattcgctccaccatacattccacttccatctcatgttcatt | |||
| Mapping_target | M01E5 | ||||
| Type_of_mutation | Substitution | a | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | SNP_Swan | |||
| WGS_De_Bono | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson4037 | ||||
| WBPerson1562 | |||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00541912 | |||
| WBVar01354119 | |||||
| WBVar00160521 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006595 | |||
| Transcript | M01E5.5b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | M01E5.5b.1:c.400-22A>T | ||||
| Intron_number | 2/5 | ||||
| M01E5.5a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | M01E5.5a.1:c.616-22A>T | ||||
| Intron_number | 3/6 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
