WormBase Tree Display for Variation: WBVar00050908

WBVar00050908 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00050908
    Other_name: pas2549
      haw41304
      cewivar00103992
      Y71H2AM.7.1:c.855-668A>T
      Y71H2AM.5.2:c.-5+30881A>T
    HGVSg: CHROMOSOME_III:g.2730565A>T
  Sequence_details: SMap: S_parent: Sequence: Y71H2AM
    Flanking_sequences: aaaaatttaaattacctaatttttt aaacttacttttaagaaaaaaattc
    Mapping_target: Y71H2AM
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (18)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01328633
        WBVar00097690
    Status: Live
  Affects: Gene: WBGene00022170
      WBGene00022172
    Transcript: Y71H2AM.5.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.5.2:c.-5+30881A>T
        Intron_number: 1/5
      Y71H2AM.7.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.7.1:c.855-668A>T
        Intron_number: 8/10
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw41304
  Method: WGS_Hawaiian_Waterston