WormBase Tree Display for Variation: WBVar00050838

WBVar00050838 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00050838
    Other_name: haw41290
      haw142044
      cewivar00195440
      Y71H2AM.7.1:c.233-71G>A
      Y71H2AM.5.2:c.-5+27008G>A
    HGVSg: CHROMOSOME_III:g.2726692G>A
  Sequence_details: SMap: S_parent: Sequence: Y71H2AM
    Flanking_sequences: attaggcttaaaatggcttaaactc caaattttcgattttttgcaaattt
    Mapping_target: Y71H2AM
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00561909
    Status: Live
  Affects: Gene: WBGene00022170
      WBGene00022172
    Transcript: Y71H2AM.5.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.5.2:c.-5+27008G>A
        Intron_number: 1/5
      Y71H2AM.7.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.7.1:c.233-71G>A
        Intron_number: 4/10
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw41290
  Method: WGS_Hawaiian_Waterston