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WormBase Tree Display for Variation: WBVar00050573

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Name Class

WBVar00050573NamePublic_nameWBVar00050573
Other_namehaw41237
haw142004
cewivar00103932
Y71H2AM.5.2:c.-5+6912A>T
Y71H2AM.8.1:c.1228-180A>T
HGVSgCHROMOSOME_III:g.2706596A>T
Sequence_detailsSMapS_parentSequenceY71H2AM
Flanking_sequencesgtaaaattttcggaattaaaaaaaaatacttttttgaaaaatctaataat
Mapping_targetY71H2AM
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00561869
WBVar01328541
StatusLive
AffectsGeneWBGene00022173
WBGene00022170
TranscriptY71H2AM.5.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.5.2:c.-5+6912A>T
Intron_number1/5
Y71H2AM.8.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71H2AM.8.1:c.1228-180A>T
Intron_number6/7
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw41237
MethodWGS_Hawaiian_Waterston