WormBase Tree Display for Variation: WBVar00050238
expand all nodes | collapse all nodes | view schema
WBVar00050238 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00050238 | |||
Other_name | haw41170 | ||||
cewivar00195376 | |||||
H19M22.2a.1:c.11811-337T>C | |||||
H19M22.2b.1:c.11802-337T>C | |||||
H19M22.2c.1:c.129-337T>C | |||||
HGVSg | CHROMOSOME_III:g.2677550T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y71H2AL | |
Flanking_sequences | ataggttcaggctgttcagatatta | taagtgaatagagtatattgtttaa | |||
Mapping_target | Y71H2AL | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01328459 | |||
Status | Live | ||||
Affects | Gene | WBGene00002915 | |||
Transcript | H19M22.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H19M22.2a.1:c.11811-337T>C | ||||
Intron_number | 20/26 | ||||
H19M22.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H19M22.2c.1:c.129-337T>C | ||||
Intron_number | 3/8 | ||||
H19M22.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H19M22.2b.1:c.11802-337T>C | ||||
Intron_number | 20/28 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw41170 | ||||
Method | WGS_Hawaiian_Waterston |