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WormBase Tree Display for Variation: WBVar00050238

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Name Class

WBVar00050238EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00050238
Other_namehaw41170
cewivar00195376
H19M22.2a.1:c.11811-337T>C
H19M22.2b.1:c.11802-337T>C
H19M22.2c.1:c.129-337T>C
HGVSgCHROMOSOME_III:g.2677550T>C
Sequence_detailsSMapS_parentSequenceY71H2AL
Flanking_sequencesataggttcaggctgttcagatattataagtgaatagagtatattgtttaa
Mapping_targetY71H2AL
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01328459
StatusLive
AffectsGeneWBGene00002915
TranscriptH19M22.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH19M22.2a.1:c.11811-337T>C
Intron_number20/26
H19M22.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH19M22.2c.1:c.129-337T>C
Intron_number3/8
H19M22.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH19M22.2b.1:c.11802-337T>C
Intron_number20/28
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw41170
MethodWGS_Hawaiian_Waterston